1DYZ

OXIDISED AZURIN II FROM ALCALIGENES XYLOSOXIDANS

Structural Biology Knowledgebase: 1DYZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.189

Literature

Macromolecules
Sequence Display for 1DYZ

Classification: ELECTRON TRANSPORT

Total Structure Weight: 13857.42

Macromolecule Entities
Molecule Chains Length Organism Details
AZURIN II A 129 Achromobacter xylosoxidans Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CU
Query on CU

A COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.205
  • R-Value Work: 0.189
  • Space Group: P 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.65 α = 90.00
b = 52.65 β = 90.00
c = 100.63 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-02-11
  • Released Date: 2000-07-10
  • Deposition author(s): Dodd, F.E., Abraham, Z.H.L., Eady, R.R., Hasnain, S.S.
  • Previous versions: 1ARN

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Remove strain from scientific name