1DY4

CBH1 IN COMPLEX WITH S-PROPRANOLOL


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.191

Literature

Macromolecules
Sequence Display for 1DY4

Classification: HYDROLASE

Total Structure Weight: 46830.33

Macromolecule Entities
Molecule Chains Length Organism Details
EXOGLUCANASE 1 A 434 Trichoderma reesei EC#: 3.2.1.91 IUBMB
Fragment: CATALYTIC DOMAIN, RESIDUES 18-451
Gene Name(s): cbh1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SNP
Query on SNP

A 1-(ISOPROPYLAMINO)-3-(1-NAPHTHYLOXY)-2-PROPANOL
S-PROPRANOLOL (Synonym)
C16 H21 N O2
AQHHHDLHHXJYJD-AWEZNQCLSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO
Query on CO

A COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
SNP N/A in BindingDB
Ki: 44000 nM  BindingMOAD
Ki: 44000 nM  PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
A L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.220
  • R-Value Work: 0.191
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 82.96 α = 90.00
b = 83.11 β = 90.00
c = 110.68 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-26
  • Released Date: 2000-12-18
  • Deposition author(s): Stahlberg, J., Henriksson, H., Divne, C., Isaksson, R., Pettersson, G., Johansson, G., Jones, T.A.

Revision History

  • Version 1_0: 2000-12-18

    Type: Initial release

  • Version 1_1: 2011-07-20

    Type: Other

  • Version 1_2: 2014-02-12

    Type: Source and taxonomy

  • Version 1_3: 2017-07-05

    Type: Data collection