1DQY

CRYSTAL STRUCTURE OF ANTIGEN 85C FROM MYCOBACTERIUM TUBERCULOSIS WITH DIETHYL PHOSPHATE INHIBITOR

Structural Biology Knowledgebase: 1DQY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 1DQY

Classification: IMMUNE SYSTEM

Total Structure Weight: 31589.25

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (ANTIGEN 85-C) A 283 Mycobacterium tuberculosis EC#: 2.3.1.122 IUBMB 2.3.1.20 IUBMB
Mutation: A0M, G156S
Gene Name(s): fbpC mpt45 Rv0129c MTCI5.03c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DEP
Query on DEP

A DIETHYL PHOSPHONATE
C4 H11 O3 P
MJUJXFBTEFXVKU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MRD
Query on MRD

A (4R)-2-METHYLPENTANE-2,4-DIOL
C6 H14 O2
SVTBMSDMJJWYQN-RXMQYKEDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.168
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 128.80 α = 90.00
b = 67.81 β = 102.73
c = 39.76 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-05
  • Released Date: 2000-07-12
  • Deposition author(s): Ronning, D.R., Klabunde, T., Sacchettini, J.C., TB Structural Genomics Consortium (TBSGC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4