1DQ5

Manganese;Manganese concanavalin A at pH 5.0

Structural Biology Knowledgebase: 1DQ5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.189

Literature

Macromolecules
Sequence Display for 1DQ5

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 25732.45

Macromolecule Entities
Molecule Chains Length Organism Details
MANGANESE;MANGANESE CONCANAVALIN A (PH 5.0) A 237 Canavalia ensiformis Mutation: E151D, R155E
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.189
  • Space Group: I 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 63.23 α = 90.00
b = 87.44 β = 90.00
c = 89.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-30
  • Released Date: 2000-01-19
  • Deposition author(s): Bouckaert, J., Dewallef, Y., Poortmans, F., Wyns, L., Loris, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values