1DO6

CRYSTAL STRUCTURE OF SUPEROXIDE REDUCTASE IN THE OXIDIZED STATE AT 2.0 ANGSTROM RESOLUTION

Structural Biology Knowledgebase: 1DO6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.160

Literature

Macromolecules
Sequence Display for 1DO6

Classification: OXIDOREDUCTASE

Total Structure Weight: 28800.35

Macromolecule Entities
Molecule Chains Length Organism Details
SUPEROXIDE REDUCTASE A, B 124 Pyrococcus furiosus EC#: 1.15.1.2 IUBMB
Gene Name(s): sorA PF1281
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE
Query on FE

A, B FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.160
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 50.31 α = 90.00
b = 94.02 β = 90.00
c = 52.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-19
  • Released Date: 2000-03-24
  • Deposition author(s): Yeh, A.P., Hu, Y., Jenney Junior, F.E., Adams, M.W., Rees, D.C.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4