1DMG

CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L4

Structural Biology Knowledgebase: 1DMG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1DMG

Classification: GENE REGULATION

Total Structure Weight: 25883.21

Macromolecule Entities
Molecule Chains Length Organism Details
RIBOSOMAL PROTEIN L4 A 225 Thermotoga maritima Gene Name(s): rplD TM_1499
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CIT
Query on CIT

A CITRIC ACID
C6 H8 O7
KRKNYBCHXYNGOX-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.208
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 43.00 α = 90.00
b = 48.60 β = 90.00
c = 112.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-14
  • Released Date: 2000-12-18
  • Deposition author(s): Worbs, M., Huber, R., Wahl, M.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4