1DLF

HIGH RESOLUTION CRYSTAL STRUCTURE OF THE FV FRAGMENT FROM AN ANTI-DANSYL SWITCH VARIANT ANTIBODY IGG2A(S) CRYSTALLIZED AT PH 5.25


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1DLF

Classification: IMMUNOGLOBULIN

Total Structure Weight: 26923.99

Macromolecule Entities
Molecule Chains Length Organism Details
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) L 113 Mus musculus Fragment: FV FRAGMENT (VH AND VL DOMAINS)
Mutation: D17N, Y96F, G100S
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ANTI-DANSYL IMMUNOGLOBULIN IGG2A(S) H 124 Mus musculus Fragment: FV FRAGMENT (VH AND VL DOMAINS)
Mutation: A24T, G49A, S52AN, S76R, S77R, S82BT, P94G, T97Y, T98H, G99Y, A100P

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

H SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.183
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.10 α = 90.00
b = 70.72 β = 90.00
c = 53.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-14
  • Released Date: 1999-07-26
  • Deposition author(s): Nakasako, M., Takahashi, H., Shimada, I., Arata, Y.

Revision History

  • 2008-03-24
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance