1DCK

STRUCTURE OF UNPHOSPHORYLATED FIXJ-N COMPLEXED WITH MN2+

Structural Biology Knowledgebase: 1DCK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1DCK

Classification: TRANSCRIPTION

Total Structure Weight: 29454.89

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ A, B 126 Sinorhizobium meliloti Fragment: N-TERMINAL DOMAIN (RESIDUES 1-126)
Mutation: T2Q, A125L
Gene Name(s): fixJ RA0669 SMa1227
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
15P
Query on 15P

A POLYETHYLENE GLYCOL (N=34)
PEG 1500 (Synonym)
C69 H140 O35
VUYXVWGKCKTUMF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A, B MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.206
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 31.70 α = 93.20
b = 42.50 β = 103.00
c = 44.70 γ = 101.80

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-11-05
  • Released Date: 1999-11-26
  • Deposition author(s): Gouet, P., Fabry, B., Guillet, V., Birck, C., Mourey, L., Kahn, D., Samama, J.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4