NMR Ensemble

1D6D

SOLUTION DNA STRUCTURE CONTAINING (A-A)-T TRIADS INTERDIGITATED BETWEEN A-T BASE PAIRS AND GGGG TETRADS; NMR, 8 STRUCT.

Structural Biology Knowledgebase: 1D6D SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 8
  • Selection Criteria: Back Calculated Data Agree with Experimental Noesy Spectrum Structures with Acceptable Covalent Geometry Structures with Favorable Non Bond Energy Structures with the Least Restraint Violations Structures with the Lowest Energy

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1D6D

Classification: DNA

Total Structure Weight: 7482.99

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*AP*AP*GP*GP*TP*TP*TP*TP*AP*AP*GP*G)-3' A, B 12 synthetic


Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 8
  • Selection Criteria: BACK CALCULATED DATA AGREE WITH EXPERIMENTAL NOESY SPECTRUM,STRUCTURES WITH ACCEPTABLE COVALENT GEOMETRY,STRUCTURES WITH FAVORABLE NON-BOND ENERGY, STRUCTURES WITH THE LEAST RESTRAINT VIOLATIONS,STRUCTURES WITH THE LOWEST ENERGY

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-10-13
  • Released Date: 2000-01-17
  • Deposition author(s): Kuryavyi, V.V., Kettani, A., Wang, W., Jones, R., Patel, D.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4