1D5W

PHOSPHORYLATED FIXJ RECEIVER DOMAIN

Structural Biology Knowledgebase: 1D5W SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 1D5W

Classification: GENE REGULATION

Total Structure Weight: 42264.52

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ A, B, C 126 Sinorhizobium meliloti Fragment: FIXJ RECEIVER DOMAIN (RESIDUES 1-126)
Mutation: T2Q, D54X, A125L
Gene Name(s): fixJ RA0669 SMa1227
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PHD
Query on PHD
A, B, C L-PEPTIDE LINKING C4 H8 N O7 P ASP

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.217
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 132.15 α = 90.00
b = 91.30 β = 112.45
c = 59.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-10-12
  • Released Date: 2000-10-11
  • Deposition author(s): Birck, C., Mourey, L., Gouet, P., Fabry, B., Schumacher, J., Rousseau, P., Kahn, D., Samama, J.P.

Revision History

  • 2012-08-22
    Type: Other | Details: re-release with updated sf file
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4