1D1P

CRYSTAL STRUCTURE OF A YEAST LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE (LTP1)

Structural Biology Knowledgebase: 1D1P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.169

Literature

Macromolecules
Sequence Display for 1D1P

Classification: HYDROLASE

Total Structure Weight: 37620.95

Macromolecule Entities
Molecule Chains Length Organism Details
TYROSINE PHOSPHATASE A, B 160 Saccharomyces cerevisiae EC#: 3.1.3.48 IUBMB
Gene Name(s): LTP1 YPR073C YP9499.28C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EPE
Query on EPE

A, B 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES (Synonym)
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
EPE N/A in BindingDB
N/A in BindingMoad
Ki: 250000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.169
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 41.59 α = 90.00
b = 67.65 β = 90.00
c = 115.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-09-20
  • Released Date: 2000-03-08
  • Deposition author(s): Wang, S., Tabernero, L., Zhang, M., Harms, E., Van Etten, R.L., Stauffacher, C.V.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4