NMR Ensemble

1CYZ

NMR STRUCTURE OF THE GAACTGGTTC/TRI-IMIDAZOLE POLYAMIDE COMPLEX

Structural Biology Knowledgebase: 1CYZ SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 11
  • Conformers Submitted: 1
  • Selection Criteria: Refined Average Structure

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1CYZ

Classification: DNA

Total Structure Weight: 7093.10

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*AP*AP*CP*TP*GP*GP*TP*TP*C)-3' A, B 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AR1
Query on AR1

A, B (2-{[4-({4-[(4-FORMYLAMINO-1-METHYL-1H-IMIDAZOLE- 2-CARBONYL)-AMINO]-1-METHYL-1H-IMIDAZOLE- 2-CARBONYL}-AMINO)-1-METHYL-1H-IMIDAZOLE- 2-CARBONYL]-AMINO}-ETHYL)-DIMETHYL-AMMONIUM
TRI-IMIDAZOLE DNA MINOR GROOVE BINDER; AR- 1-144 (Synonym)
C20 H28 N11 O4
PFRKDKQPQSBYQX-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 11
  • Conformers Submitted: 1
  • Selection Criteria: REFINED AVERAGE STRUCTURE

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-08-31
  • Released Date: 1999-09-14
  • Deposition author(s): Yang, X.-L., Hubbard IV, R.B., Lee, M., Tao, Z.-F., Sugiyama, H., Wang, A.H.-J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4