1CXQ

ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN FROM AMMONIUM SULFATE

Structural Biology Knowledgebase: 1CXQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.02 Å
  • R-Value Free: 0.157
  • R-Value Work: 0.130

Literature

Macromolecules
Sequence Display for 1CXQ

Classification: TRANSFERASE

Total Structure Weight: 18278.08

Macromolecule Entities
Molecule Chains Length Organism Details
AVIAN SARCOMA VIRUS INTEGRASE A 162 Avian sarcoma virus Fragment: CATALYTIC CORE DOMAIN
Mutation: P52G, V101A, R166K
Gene Name(s): gag-pro-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EPE
Query on EPE

A 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES (Synonym)
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.02 Å
  • R-Value Free: 0.157
  • R-Value Work: 0.130
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 65.54 α = 90.00
b = 65.54 β = 90.00
c = 80.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-08-30
  • Released Date: 1999-09-08
  • Deposition author(s): Lubkowski, J., Dauter, Z., Yang, F., Alexandratos, J., Merkel, G., Skalka, A.M., Wlodawer, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update