1C8D

CANINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.214

Literature

Macromolecules
Sequence Display for 1C8D

Classification: VIRUS

Total Structure Weight: 64823.71

Macromolecule Entities
Molecule Chains Length Organism Details
CANINE PARVOVIRUS CAPSID A 584 Carnivore protoparvovirus 1 Details: CAPSID OF CANINE PARVOVIRUS STRAIN D - EMPTY CAPSID
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.214
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 267.56 α = 61.95
b = 268.45 β = 62.62
c = 274.33 γ = 60.19

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-05-05
  • Released Date: 2000-08-09
  • Deposition author(s): Rossmann, M.G., Simpson, A.A.

Revision History

  • Version 1_0: 2000-08-09

    Type: Initial release

  • Version 1_1: 2008-04-26

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-04

    Type: Refinement description