1BVD

STRUCTURE OF A BILIVERDIN APOMYOGLOBIN COMPLEX (FORM B) AT 98 K

Structural Biology Knowledgebase: 1BVD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 1BVD

Classification: OXYGEN STORAGE

Total Structure Weight: 17817.78

Macromolecule Entities
Molecule Chains Length Organism Details
APOMYOGLOBIN A 153 Physeter catodon Details: CRYSTAL FORM B
Gene Name(s): MB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BLA
Query on BLA

A BILIVERDINE IX ALPHA
C33 H34 N4 O6
GWZYPXHJIZCRAJ-SRVCBVSDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.212
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 39.80 α = 90.00
b = 50.60 β = 90.00
c = 74.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1994-12-16
  • Released Date: 1995-07-31
  • Deposition author(s): Wagner, U.G., Mueller, N., Schmitzberger, W., Falk, H., Kratky, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4