1BP0

THYMIDYLATE SYNTHASE R23I MUTANT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1BP0

Classification: TRANSFERASE

Total Structure Weight: 36933.70

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (THYMIDYLATE SYNTHASE) A 316 Lactobacillus casei EC#: 2.1.1.45 IUBMB
Mutation: R23I
Gene Name(s): thyA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UMP
Query on UMP

A 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
DUMP (Synonym)
C9 H13 N2 O8 P
JSRLJPSBLDHEIO-SHYZEUOFSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
UMP N/A in BindingDB
Kd: 4000 nM  BindingMOAD
Kd: 4000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.197
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 79.10 α = 90.00
b = 79.10 β = 90.00
c = 243.30 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-08-11
  • Released Date: 2000-01-12
  • Deposition author(s): Morse, R., Finer-Moore, J., Stroud, R.M.

Revision History

  • 2007-10-16
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance