1BM6

SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN STROMELYSIN-1 COMPLEXED TO A POTENT NON-PEPTIDIC INHIBITOR, NMR, 20 STRUCTURES


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50
  • Conformers Submitted: 20
  • Selection Criteria: Least Restraint Violation Energy Minimization

Literature

Macromolecules
Sequence Display for 1BM6

Classification: METALLOPROTEASE

Total Structure Weight: 20024.99

Macromolecule Entities
Molecule Chains Length Organism Details
STROMELYSIN-1 A 173 Homo sapiens EC#: 3.4.24.17 IUBMB
Gene Name(s): MMP3 Gene View STMY1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MSB
Query on MSB

A 1-METHYLOXY-4-SULFONE-BENZENE
C7 H8 O3 S
XUNSZADDFLWFOL-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HAV
Query on HAV

A HYDROXYAMINOVALINE
C5 H12 N2 O2
USSBBYRBOWZYSB-SCSAIBSYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
3MP
Query on 3MP

A 3-METHYLPYRIDINE
C6 H7 N
ITQTTZVARXURQS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50
  • Conformers Submitted: 20
  • Selection Criteria: LEAST RESTRAINT VIOLATION, ENERGY MINIMIZATION

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-29
  • Released Date: 1999-07-29
  • Deposition author(s): Li, Y., Zhang, X., Melton, R., Ganu, V., Gonnella, N.C.

Revision History

  • Version 1_0: 1999-07-29

    Type: Initial release

  • Version 1_1: 2008-03-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance