1BAF

2.9 ANGSTROMS RESOLUTION STRUCTURE OF AN ANTI-DINITROPHENYL-SPIN-LABEL MONOCLONAL ANTIBODY FAB FRAGMENT WITH BOUND HAPTEN

Structural Biology Knowledgebase: 1BAF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.195

Literature

Macromolecules
Sequence Display for 1BAF

Classification: IMMUNE SYSTEM

Total Structure Weight: 47613.31

Macromolecule Entities
Molecule Chains Length Organism Details
IGG1-KAPPA AN02 FAB (LIGHT CHAIN) L 214 Mus musculus Mutation: Q17E, I21M, ΔS30, ΔS31, R30Y, F31Y, L32M, H33Y, S39P, A41S, K44R, W46L, K52N, P55S, A59V, S76R, S84T, F86Y, H88Q, L96I, A100V
IGG1-KAPPA AN02 FAB (HEAVY CHAIN) H 217 Mus musculus Mutation: L18Q, V29I, E32D, L49M, I52M, N53S, S59R, K65R, N84K, Y95F, ΔD116, S99G, F102L, L110Q, T112S, A115E, T189P, W190R

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NPP
Query on NPP

L N-(2-AMINO-ETHYL)-4,6-DINITRO-N'-(2,2,6,6- TETRAMETHYL-1-OXY-PIPERIDIN-4-YL)-BENZENE- 1,3-DIAMINE
C17 H27 N6 O5
FOFORQYTEPGQOY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.195
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 73.23 α = 90.00
b = 73.23 β = 90.00
c = 373.80 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1992-01-16
  • Released Date: 1994-01-31
  • Deposition author(s): Leahy, D.J., Brunger, A.T., Fox, R.O., Hynes, T.R.

Revision History

  • 2013-09-18
    Type: Source and taxonomy | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4