CRYSTAL STRUCTURE OF A PHYCOUROBILIN-CONTAINING PHYCOERYTHRIN
1B8D
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Photosynthesis
    Structure Weight: 78947.79
    Molecule: PROTEIN (RHODOPHYTAN PHYCOERYTHRIN (ALPHA CHAIN))
    Polymer: 1 Type: protein Length: 164
    Chains: A, K
    Details: PHYCOERYTHROBILIN PHYCOUROBILIN N-GAMMA METHYLATION OF ASN B72 AND ASN L72
    Organism: Griffithsia monilis
    Gene Names: cpeA rpeA
    UniProtKB: Protein Feature View | Search PDB | O36005  
    Molecule: PROTEIN (RHODOPHYTAN PHYCOERYTHRIN (BETA CHAIN))
    Polymer: 2 Type: protein Length: 177
    Chains: B, L
    Details: PHYCOERYTHROBILIN PHYCOUROBILIN N-GAMMA METHYLATION OF ASN B72 AND ASN L72
    Organism: Griffithsia monilis
    Gene Name: cpeB
    UniProtKB: Protein Feature View | Search PDB | O36004  
    Molecule: PROTEIN (RHODOPHYTAN PHYCOERYTHRIN (GAMMA CHAIN))
    Polymer: 3 Type: protein Length: 6
    Chains: G
    Organism: Griffithsia monilis
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Griffithsia monilis   Taxonomy    
    Polymer: 2
    Scientific Name: Griffithsia monilis   Taxonomy    
    Polymer: 3
    Scientific Name: Griffithsia monilis   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    PEB
    Search 
    Download 
    PEB C33 H40 N4 O6
    PHYCOERYTHROBILIN
    PEB:1B8D
    PUB
    Search 
    Download 
    PUB C33 H42 N4 O6
    PHYCOUROBILIN
    PUB:1B8D
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MEN
    Search 
    MEN C5 H10 N2 O3 ASN lPeptideLinking
    UNK
    Search 
    UNK C4 H9 N O2 lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Ritter, S.,  Hiller, R.G.,  Wrench, P.M.,  Welte, W.,  Diederichs, K.

    Deposition:   1999-01-29
    Release:   1999-02-18
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.90
    R-Value: 0.175 (work)
    R-Free: 0.227
    Space Group: H 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 187.35 α = 90.00 
    b = 187.35 β = 90.00 
    c = 59.31 γ = 120.00