1B7V

Structure of the C-553 cytochrome from Bacillus pasteruii to 1.7 A resolution

Structural Biology Knowledgebase: 1B7V SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.174

Literature

Macromolecules
Sequence Display for 1B7V

Classification: ELECTRON TRANSFER

Total Structure Weight: 7732.49

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (CYTOCHROME C-553) A 71 Sporosarcina pasteurii Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.174
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 37.09 α = 90.00
b = 39.16 β = 90.00
c = 43.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-01-22
  • Released Date: 2000-03-27
  • Deposition author(s): Gonzalez, A., Benini, S., Rypniewski, W.R., Wilson, K.S., Ciurli, S.

Revision History

  • 2013-01-30
    Type: Data collection | Details: Rsym for data collection was reported in percentage. Correct values based on publication
  • 2013-01-30
    Type: Other | Details: Vm and solvent content were incorrect. Correct values taken from publication
  • 2013-01-30
    Type: Citation | Details: Citation update
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4