1B07

CRK SH3 DOMAIN COMPLEXED WITH PEPTOID INHIBITOR

Structural Biology Knowledgebase: 1B07 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.354
  • R-Value Work: 0.242

Literature

Macromolecules
Sequence Display for 1B07

Classification: SH3 DOMAIN

Total Structure Weight: 9319.47

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (PROTO-ONCOGENE CRK (CRK)) A 65 Mus musculus Fragment: SH3 DOMAIN
Gene Name(s): Crk Crko
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (SH3 PEPTOID INHIBITOR) C 12 Mus musculus Gene Name(s): Sos1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PYJ
Query on PYJ

C PHENYLETHANE
C8 H10
YNQLUTRBYVCPMQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.354
  • R-Value Work: 0.242
  • Space Group: P 43

Unit Cell:

Length (Å) Angle (°)
a = 36.80 α = 90.00
b = 36.80 β = 90.00
c = 52.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-11-17
  • Released Date: 1999-01-06
  • Deposition author(s): Nguyen, J.T., Turck, C.W., Cohen, F.E., Zuckermann, R.N., Lim, W.A.

Revision History

  • 2013-12-25
    Type: Non-polymer description | Details: Change PYL to PYJ
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4