1AP8

TRANSLATION INITIATION FACTOR EIF4E IN COMPLEX WITH M7GDP, NMR, 20 STRUCTURES

Structural Biology Knowledgebase: 1AP8 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 60
  • Conformers Submitted: 20
  • Selection Criteria: No Violation Above 0.5 Angstroms and 5 Degree Dihedral Angle

Literature

Macromolecules
Sequence Display for 1AP8

Classification: RNA CAP

Total Structure Weight: 24746.67

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSLATION INITIATION FACTOR EIF4E A 213 Saccharomyces cerevisiae Gene Name(s): CDC33 TIF45 YOL139C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
M7G
Query on M7G

A 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE
C11 H19 N5 O11 P2
QQODJOAVWUWVHJ-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 60
  • Conformers Submitted: 20
  • Selection Criteria: NO VIOLATION ABOVE 0.5 ANGSTROMS AND 5 DEGREE DIHEDRAL ANGLE

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-07-25
  • Released Date: 1998-01-28
  • Deposition author(s): Matsuo, H., Li, H., Mcguire, A.M., Fletcher, M., Gingras, A.C., Sonenberg, N., Wagner, G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4