NMR Ensemble

1AJF

SOLUTION STRUCTURE OF THE P5B STEM LOOP FROM A GROUP I INTRON COMPLEXED WITH COBALT (III) HEXAMMINE, NMR, MINIMIZED AVERAGE STRUCTURE

Structural Biology Knowledgebase: 1AJF SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 32
  • Conformers Submitted: 1
  • Selection Criteria: Noe Energy (least Restraint Violations) Total Energy

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1AJF

Classification: RNA

Total Structure Weight: 5973.67

Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*GP*AP*CP*AP*GP*GP*GP*GP*AP*AP*AP*CP*UP*UP*UP*GP*UP*C)-3') A 18 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NCO
Query on NCO

A COBALT HEXAMMINE(III)
Co H18 N6
DYLMFCCYOUSRTK-FGTKAUEHAT
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 32
  • Conformers Submitted: 1
  • Selection Criteria: NOE ENERGY (LEAST RESTRAINT VIOLATIONS), TOTAL ENERGY

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1997-05-02
  • Released Date: 1997-07-07
  • Deposition author(s): Kieft, J.S., Tinoco Junior, I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4