153D

CRYSTAL STRUCTURE OF A MISPAIRED DODECAMER, D(CGAGAATTC(O6ME)GCG)2, CONTAINING A CARCINOGENIC O6-METHYLGUANINE

Structural Biology Knowledgebase: 153D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.169

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 153D

Classification: DNA

Total Structure Weight: 7402.94

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*AP*GP*AP*AP*TP*TP*CP*(6OG)P*CP*G)-3') A, B 12 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
6OG
Query on 6OG
A, B DNA LINKING C11 H16 N5 O7 P DG

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.169
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 25.13 α = 90.00
b = 40.45 β = 90.00
c = 64.51 γ = 90.00

Structure Validation

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Entry History

Deposition Data

  • Deposited Date: 1993-12-16
  • Released Date: 1994-01-15
  • Deposition author(s): Ginell, S.L., Vojtechovsky, J., Gaffney, B., Jones, R., Berman, H.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4