152D

DIVERSITY OF WATER RING SIZE AT DNA INTERFACES: HYDRATION AND DYNAMICS OF DNA-ANTHRACYCLINE COMPLEXES

Structural Biology Knowledgebase: 152D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Observed: 0.226

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 152D

Classification: DNA

Total Structure Weight: 2336.76

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*AP*TP*CP*G)-3') A 6 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DM1
Query on DM1

A DAUNOMYCIN
DAUNORUBICIN (Synonym)
C27 H29 N O10
STQGQHZAVUOBTE-VGBVRHCVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Observed: 0.226
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 27.85 α = 90.00
b = 27.85 β = 90.00
c = 52.33 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1993-12-13
  • Released Date: 1994-05-04
  • Deposition author(s): Lipscomb, L.A., Peek, M.E., Zhou, F.X., Bertrand, J.A., VanDerveer, D., Williams, L.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4