4RHW

Crystal structure of Apaf-1 CARD and caspase-9 CARD complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 4RHW

Classification: APOPTOSIS

Total Structure Weight: 70625.28

Macromolecule Entities
Molecule Chains Length Organism Details
Apoptotic protease-activating factor 1 A, B, C, D 97 Homo sapiens Fragment: card domain
Gene Name(s): APAF1 Gene View KIAA0413
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Caspase-9 E, F 108 Homo sapiens EC#: 3.4.22.62 IUBMB
Fragment: card domain
Gene Name(s): CASP9 Gene View MCH6
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

B, D CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.210
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 64.53 α = 90.00
b = 92.52 β = 109.12
c = 68.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-10-03
  • Released Date: 2014-10-15
  • Deposition author(s): Hu, Q., Wu, D., Yan, C., Shi, Y.

Revision History

No revisions since initial release