3FYS

Crystal Structure of DegV, a fatty acid binding protein from Bacillus subtilis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.148

Literature

Macromolecules
Sequence Display for 3FYS

Classification: FATTY ACID-BINDING PROTEIN

Total Structure Weight: 36050.89

Macromolecule Entities
Molecule Chains Length Organism Details
Protein degV A 315 Bacillus subtilis Gene Name(s): degV yviA BSU35480
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLM
Query on PLM

A PALMITIC ACID
C16 H32 O2
IPCSVZSSVZVIGE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BR
Query on BR

A BROMIDE ION
Br
CPELXLSAUQHCOX-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.148
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 42.10 α = 90.00
b = 84.70 β = 94.10
c = 42.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-23
  • Released Date: 2009-05-12
  • Deposition author(s): Nan, J., Zhou, Y.F., Yang, C.

Revision History

  • Version 1_0: 2009-05-12

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance