3R6N

Crystal structure of a rigid four spectrin repeat fragment of the human desmoplakin plakin domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.216

Literature

Macromolecules
Sequence Display for 3R6N

Classification: CELL ADHESION

Total Structure Weight: 107196.45

Macromolecule Entities
Molecule Chains Length Organism Details
Desmoplakin A, B 450 Homo sapiens Fragment: Plakin domain
Gene Name(s): DSP Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DTT
Query on DTT

A, B 2,3-DIHYDROXY-1,4-DITHIOBUTANE
1,4-DITHIOTHREITOL (Synonym)
C4 H10 O2 S2
VHJLVAABSRFDPM-IMJSIDKUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
D1D
Query on D1D

A, B (4S,5S)-1,2-DITHIANE-4,5-DIOL
C4 H8 O2 S2
YPGMOWHXEQDBBV-QWWZWVQMSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.95 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.216
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 157.52 α = 90.00
b = 82.52 β = 125.54
c = 139.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-03-22
  • Released Date: 2011-05-11
  • Deposition author(s): Choi, H.-J., Weis, W.I.

Revision History

  • Version 1_0: 2011-05-11

    Type: Initial release

  • Version 1_1: 2011-07-13

    Type: Version format compliance