3DI2

Crystal structure of the complex of human interleukin-7 with unglycosylated human interleukin-7 receptor alpha ectodomain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.267
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 3DI2

Classification: CYTOKINE / CYTOKINE RECEPTOR

Total Structure Weight: 86711.23

Macromolecule Entities
Molecule Chains Length Organism Details
Interleukin-7 A, C 154 Homo sapiens Fragment: UNP residues 26 to 177
Mutation: E106A
Gene Name(s): IL7 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Interleukin-7 receptor subunit alpha B, D 223 Homo sapiens Fragment: UNP residues 21 to 239 (ligand binding ectodomain)
Mutation: I118V
Gene Name(s): IL7R Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1PE
Query on 1PE

A PENTAETHYLENE GLYCOL
PEG400 (Synonym)
C10 H22 O6
JLFNLZLINWHATN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.267
  • R-Value Work: 0.212
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 47.20 α = 90.00
b = 113.02 β = 105.10
c = 87.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-06-19
  • Released Date: 2009-01-27
  • Deposition author(s): McElroy, C.A., Dohm, J.A., Walsh, S.T.R.

Revision History

  • 2011-07-13
    Type: Version format compliance