2HXF

KIF1A head-microtubule complex structure in amppnp-form


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 10.0 Å
  • Aggregation State: Filament
  • Reconstruction Method: Helical

Literature

Macromolecules
Sequence Display for 2HXF

Classification: TRANSPORT PROTEIN

Total Structure Weight: 146706.98

Macromolecule Entities
Molecule Chains Length Organism Details
Tubulin alpha chain A 451 Sus scrofa Gene Name(s): TUBA1A Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Tubulin beta chain B 445 Sus scrofa Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Kinesin-like protein KIF1A C 394 Mus musculus Fragment: KIF1A HEAD DOMAIN
Mutation: P202A
Gene Name(s): Kif1a Atsv Kif1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TA1
Query on TA1

B TAXOL
C47 H51 N O14
RCINICONZNJXQF-MZXODVADSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GTP
Query on GTP

A GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ANP
Query on ANP

C PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GDP
Query on GDP

B GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, C MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 10.0 Å
  • Reconstruction Method: Helical

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-08-03
  • Released Date: 2006-10-10
  • Deposition author(s): Kikkawa, M., Hirokawa, N.

Revision History

  • 2008-05-01
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance