2A5T

Crystal Structure Of The NR1/NR2A ligand-binding cores complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 2A5T

Classification: METAL TRANSPORT MEMBRANE PROTEIN

Total Structure Weight: 65414.62

Macromolecule Entities
Molecule Chains Length Organism Details
N-methyl-D-aspartate receptor NMDAR1-4a subunit A 292 Canis lupus Rattus norvegicus Fragment: S1S2 ligand-binding core
Mutation: Y129N
Details: construct of residues 394-544 and 663-800 of GB AAB50932
Gene Name(s): Grin1 Nmdar1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
N-methyl-D-aspartate receptor NMDAR2A subunit B 284 Rattus norvegicus Fragment: S1S2 ligand-binding core
Details: construct of residues 401-539 and 661-802 of GB AAB58801
Gene Name(s): Grin2a
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GLU
Query on GLU

B GLUTAMIC ACID
C5 H9 N O4
WHUUTDBJXJRKMK-VKHMYHEASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GLY
Query on GLY

A GLYCINE
C2 H5 N O2
DHMQDGOQFOQNFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.213
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 54.64 α = 90.00
b = 89.99 β = 90.00
c = 126.12 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-06-30
  • Released Date: 2005-11-15
  • Deposition author(s): Furukawa, H., Singh, S.K., Mancusso, R., Gouaux, E.

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance
  • 2017-07-26
    Type: Refinement description, Source and taxonomy