Macromolecule Annotations for the Entities in PDB 4J2X

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF09271 LAG1-DNAbind LAG1, DNA binding Domain Members of this family are found in various eukaryotic hypothetical proteins and in the DNA-binding protein LAG-1. They adopt a beta sandwich structure, with nine strands in two beta-sheets, in a Greek-key topology, and allow for DNA binding [1]. This domain is also known as RHR-N (Rel-homology region) as it related to Rel domain proteins. PFAM PF09271
A PF09271 LAG1-DNAbind LAG1, DNA binding Domain Members of this family are found in various eukaryotic hypothetical proteins and in the DNA-binding protein LAG-1. They adopt a beta sandwich structure, with nine strands in two beta-sheets, in a Greek-key topology, and allow for DNA binding [1]. This domain is also known as RHR-N (Rel-homology region) as it related to Rel domain proteins. PFAM PF09271
A PF09270 BTD Beta-trefoil DNA-binding domain Domain Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1]. PFAM PF09270
A PF09270 BTD Beta-trefoil DNA-binding domain Domain Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1]. PFAM PF09270

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,C Recombining binding protein suppressor of hairless (4J2X:A,C)
B,D Four and a half LIM domains protein 1 (4J2X:B,D)
  • none
  • none
  • none
E,G 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)- 3' (4J2X:E,G)
  • none
  • none
  • none
F,H 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)- 3' (4J2X:F,H)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description