Macromolecule Annotations for the Entities in PDB 4HSB

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00730 HhH-GPD HhH-GPD superfamily base excision DNA repair protein Domain This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate [2]. This includes endonuclease III, EC:4.2.99.18 and MutY an A/G-specific adenine glycosylase, both have a C terminal 4Fe-4S cluster. The family also includes 8-oxoguanine DNA glycosylases such as Swiss:P53397. The methyl-CPG binding protein MBD4 Swiss:Q9Z2D7 also contains a related domain [1] that is a thymine DNA glycosylase. The family also includes DNA-3-methyladenine glycosylase II EC:3.2.2.21 and other members of the AlkA family. PFAM PF00730

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A Probable DNA-3-methyladenine glycosylase 2 (4HSB:A)
B DNA (5'-D(P*GP*GP*AP*CP*TP*(3DR)P*AP*CP*GP*GP*G)- 3') (4HSB:B)
  • none
  • none
  • none
C DNA (5'-D(P*CP*CP*CP*GP*TP*TP*AP*GP*TP*CP*C)- 3') (4HSB:C)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description