4H4M

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-3-(3-chloro-5-(4-chloro-2-(2-(2,4-dioxo-3,4- dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)phenyl)acrylonitrile (JLJ494), a Non-nucleoside Inhibitor


Macromolecule Annotations for the Entities in PDB 4H4M

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF06817 RVT_thumb Reverse transcriptase thumb domain Domain This domain is known as the thumb domain. It is composed of a four helix bundle [1]. PFAM PF06817
A PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) Family
A PF00075 RNase_H RNase H Domain RNase H digests the RNA strand of an RNA/DNA hybrid. Important enzyme in retroviral replication cycle, and often found as a domain associated with reverse transcriptases. Structure is a mixed alpha+beta fold with three a/b/a layers. PFAM PF00075
B PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) Family
B PF06817 RVT_thumb Reverse transcriptase thumb domain Domain This domain is known as the thumb domain. It is composed of a four helix bundle [1]. PFAM PF06817
A PF06815 RVT_connect Reverse transcriptase connection domain Domain This domain is known as the connection domain. This domain lies between the thumb and palm domains [1]. PFAM PF06815
B PF06815 RVT_connect Reverse transcriptase connection domain Domain This domain is known as the connection domain. This domain lies between the thumb and palm domains [1]. PFAM PF06815

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A Reverse transcriptase/ribonuclease H, Exoribonuclease H, p66 RT (4H4M:A)
  • none
  • none
B Reverse transcriptase/ribonuclease H, Exoribonuclease H, p51 RT (4H4M:B)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description