Macromolecule Annotations for the Entities in PDB 4GSL

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF00899 ThiF ThiF family Family
C PF03987 Autophagy_act_C Autophagocytosis associated protein, active-site domain Domain Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the vacuole. The cysteine residue within the HPC motif is the putative active-site residue for recognition of the Apg5 subunit of the autophagosome complex [2]. PFAM PF03987
C PF10381 Autophagy_Cterm Autophagocytosis associated protein C-terminal Domain Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the vacuole. The small C-terminal domain is likely to be a distinct binding region for the stability of the autophagosome complex [2]. It carries a highly characteristic conserved FLKF sequence motif. PFAM PF10381
C PF03986 Autophagy_N Autophagocytosis associated protein (Atg3), N-terminal domain Domain Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the lysosome/vacuole. Atg3 is a ubiquitin like modifier that is topologically similar to the canonical E2 enzyme [3]. It catalyses the conjugation of Atg8 and phosphatidylethanolamine [4]. PFAM PF03986