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DNA ligase A in complex with inhibitor
Annotation data related to this entry.
4GLX
  •   Protein Family Annotation: Pfam Classification   Hide
    Chain Pfam Accession Pfam Family Identifier Pfam Description Type Comment
    A PF14520   HHH_5 Helix-hairpin-helix domain Domain Source: Pfam  
    A PF14520   HHH_5 Helix-hairpin-helix domain Domain Source: Pfam  
    A PF12826   HHH_2 Helix-hairpin-helix motif Motif
    A PF01653   DNA_ligase_aden NAD-dependent DNA ligase adenylation domain Domain DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilising either ATP or NAD(+) as a cofactor [1]. This domain is the catalytic adenylation domain. The NAD+ group is covalently attached to this domain at the lysine in the KXDG motif of this domain. This enzyme- adenylate intermediate is an important feature of the proposed catalytic mechanism [1]. Source: Pfam  
    A PF03119   DNA_ligase_ZBD NAD-dependent DNA ligase C4 zinc finger domain Domain DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilising either ATP or NAD(+) as a cofactor [1]. This family is a small zinc binding motif that is presumably DNA binding [1]. IT is found only in NAD dependent DNA ligases [1]. Source: Pfam  
    A PF03120   DNA_ligase_OB NAD-dependent DNA ligase OB-fold domain Domain DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilising either ATP or NAD(+) as a cofactor [1]. This family is a small domain found after the adenylation domain Pfam:PF01653 in NAD dependent ligases [1]. OB-fold domains generally are involved in nucleic acid binding. Source: Pfam  
     
  •   Gene Product Annotation: GO Terms   Hide
    Polymer Molecular Function Biological Process Cellular Component
    DNA (26-MER) (4GLX:B)
    • none
    • none
    • none
    DNA (5'-D(*AP*CP*AP*AP*TP*TP*GP*CP*GP*AP*CP*CP*C)- 3') (4GLX:C)
    • none
    • none
    • none
    DNA (5'-D(P*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*AP*TP*G)- 3') (4GLX:D)
    • none
    • none
    • none
    DNA ligase (4GLX:A)
    • none
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Annotations in orange boxes have been gathered from external resources.