Macromolecule Annotations for the Entities in PDB 4F48

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A 4f48A00 Alpha Beta Alpha-Beta Barrel TIM Barrel EAL domain-like

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF07238 PilZ PilZ domain Domain PilZ is a c-di-GMP binding domain [3] which is found C terminal to Pfam:PF07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias [5]. This domain forms a beta barrel structure. PFAM PF07238
A PF00563 EAL EAL domain Domain This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function [1]. The domain contains many conserved acidic residues that could participate in metal binding and might form the phosphodiesterase active site [1]. PFAM PF00563

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A Putative uncharacterized protein (4F48:A)
  • none
  • none
  • none
B Type IV fimbriae assembly protein (4F48:B)
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description