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Structures of HIV-1 RT and RNA-DNA Complex Reveal a Unique RT Conformation and Substrate Interface
Annotation data related to this entry.
4B3O
  •   Protein Family Annotation: Pfam Classification   Hide
    Chain Pfam Accession Pfam Family Identifier Pfam Description Type Comment
    A PF00075   RNase_H RNase H Domain RNase H digests the RNA strand of an RNA/DNA hybrid. Important enzyme in retroviral replication cycle, and often found as a domain associated with reverse transcriptases. Structure is a mixed alpha+beta fold with three a/b/a layers. Source: Pfam  
    A PF00078   RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) Family
    A PF06815   RVT_connect Reverse transcriptase connection domain Domain This domain is known as the connection domain. This domain lies between the thumb and palm domains [1]. Source: Pfam  
    B PF00078   RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) Family
    B PF06817   RVT_thumb Reverse transcriptase thumb domain Domain This domain is known as the thumb domain. It is composed of a four helix bundle [1]. Source: Pfam  
    B PF06815   RVT_connect Reverse transcriptase connection domain Domain This domain is known as the connection domain. This domain lies between the thumb and palm domains [1]. Source: Pfam  
    A PF06817   RVT_thumb Reverse transcriptase thumb domain Domain This domain is known as the thumb domain. It is composed of a four helix bundle [1]. Source: Pfam  
     
  •   Gene Product Annotation: GO Terms   Hide
    Polymer Molecular Function Biological Process Cellular Component
    REVERSE TRANSCRIPTASE/RIBONUCLEASE H (4B3O:A)
    • none
    P51 RT (4B3O:B)
    • none
    5'-D(*CP*GP*TP*AP*TP*GP*CP*CP*TP*AP*TP*AP*GP*TP *TP*AP*TP*TP*GP*TP*GP*GP*CP*C)- 3' (4B3O:D)
    • none
    • none
    • none
    5'-R(*AP*UP*GP*AP*3DRP*GP*GP*CP*CP*AP*CP*AP*AP*UP*AP *AP*CP*UP*AP*UP*AP*GP*GP*CP*AP*UP*A)- 3' (4B3O:R)
    • none
    • none
    • none
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Annotations in orange boxes have been gathered from external resources.