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Unprecedented sculpting of DNA at abasic sites by DNA glycosylase homolog Mag2
Annotation data related to this entry.
4B21
  •   Protein Family Annotation: Pfam Classification   Hide
    Chain Pfam Accession Pfam Family Identifier Pfam Description Type Comment
    A PF00730   HhH-GPD HhH-GPD superfamily base excision DNA repair protein Domain This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate [2]. This includes endonuclease III, EC:4.2.99.18 and MutY an A/G-specific adenine glycosylase, both have a C terminal 4Fe-4S cluster. The family also includes 8-oxoguanine DNA glycosylases such as Swiss:P53397. The methyl-CPG binding protein MBD4 Swiss:Q9Z2D7 also contains a related domain [1] that is a thymine DNA glycosylase. The family also includes DNA-3-methyladenine glycosylase II EC:3.2.2.21 and other members of the AlkA family. Source: Pfam  
     
  •   Gene Product Annotation: GO Terms   Hide
    Polymer Molecular Function Biological Process Cellular Component
    PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE 2 (4B21:A)
    5'-D(*GP*CP*TP*AP*CP*3DRP*GP*AP*TP*CP*GP)- 3' (4B21:X)
    • none
    • none
    • none
    5'-D(*CP*GP*AP*TP*CP*GP*GP*TP*AP*GP)-3' (4B21:Y)
    • none
    • none
    • none
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Annotations in orange boxes have been gathered from external resources.