Macromolecule Annotations for the Entities in PDB 3ZIA

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
A1 3ziaA01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
A2 3ziaA02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
A3 3ziaA03 Mainly Alpha Up-down Bundle Lysin
B1 3ziaB01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
B2 3ziaB02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
B3 3ziaB03 Mainly Alpha Up-down Bundle Lysin
C1 3ziaC01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
C2 3ziaC02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
C3 3ziaC03 Mainly Alpha Up-down Bundle Lysin
D1 3ziaD01 Mainly Beta Beta Barrel Thrombin, subunit H
D2 3ziaD02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
D3 3ziaD03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
E1 3ziaE01 Mainly Beta Beta Barrel Thrombin, subunit H
E2 3ziaE02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
E3 3ziaE03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
F1 3ziaF01 Mainly Beta Beta Barrel Thrombin, subunit H
F2 3ziaF02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
F3 3ziaF03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
G1 3ziaG01 Mainly Alpha Orthogonal Bundle Helix Hairpins
G2 3ziaG02 Alpha Beta 3-Layer(aba) Sandwich Pyruvate Kinase; Chain: A, domain 1
K1 3ziaK01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
K2 3ziaK02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
K3 3ziaK03 Mainly Alpha Up-down Bundle Lysin
L1 3ziaL01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
L2 3ziaL02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
L3 3ziaL03 Mainly Alpha Up-down Bundle Lysin
M1 3ziaM01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3
M2 3ziaM02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
M3 3ziaM03 Mainly Alpha Up-down Bundle Lysin
N1 3ziaN01 Mainly Beta Beta Barrel Thrombin, subunit H
N2 3ziaN02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
N3 3ziaN03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
O1 3ziaO01 Mainly Beta Beta Barrel Thrombin, subunit H
O2 3ziaO02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
O3 3ziaO03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
P1 3ziaP01 Mainly Beta Beta Barrel Thrombin, subunit H
P2 3ziaP02 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolases
P3 3ziaP03 Mainly Alpha Orthogonal Bundle Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
Q1 3ziaQ01 Mainly Alpha Orthogonal Bundle Helix Hairpins
Q2 3ziaQ02 Alpha Beta 3-Layer(aba) Sandwich Pyruvate Kinase; Chain: A, domain 1

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
G PF00231 ATP-synt ATP synthase Domain PFAM PF00231
A PF00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain Family
H PF02823 ATP-synt_DE_N ATP synthase, Delta/Epsilon chain, beta-sandwich domain Domain Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (Pfam:PF00213). PFAM PF02823
D PF00006 ATP-synt_ab ATP synthase alpha/beta family, nucleotide-binding domain Family
D PF02874 ATP-synt_ab_N ATP synthase alpha/beta family, beta-barrel domain Domain This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. PFAM PF02874
A PF00306 ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal domain Domain PFAM PF00306
I PF04627 ATP-synt_Eps Mitochondrial ATP synthase epsilon chain Family
A PF02874 ATP-synt_ab_N ATP synthase alpha/beta family, beta-barrel domain Domain This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. PFAM PF02874
D PF00306 ATP-synt_ab_C ATP synthase alpha/beta chain, C terminal domain Domain PFAM PF00306
J PF04568 IATP Mitochondrial ATPase inhibitor, IATP Family

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,K,L,M ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL (3ZIA:A,B,C,K,L,M)
D,E,F,N,O,P ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL (3ZIA:D,E,F,N,O,P)
G,Q ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL (3ZIA:G,Q)
H,R ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL (3ZIA:H,R)
I,S ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL (3ZIA:I,S)
J,T ATPASE INHIBITOR, MITOCHONDRIAL (3ZIA:J,T)