Contribution of histone N-terminal tails to the structure and stability of nucleosomes

Iwasaki, W; Miya, Y; Horikoshi, N; Osakabe, A; Taguchi, H; Tachiwana, H; Shibata, T; Kagawa, W; Kurumizaka, H.

139555 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

3W97

Crystal Structure of Human Nucleosome Core Particle lacking H2B N-terminal region

Macromolecule Annotations for the Entities in PDB 3W97

Protein Family Annotation Pfam Database Homepage

Chains	Pfam Accession	Pfam Identifier	Pfam Description	Type	Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A,E	Histone H3.1 (3W97:A,E)	DNA Binding Protein Binding Nucleosomal DNA Binding Cadherin Binding Protein Heterodimerization Activity	Chromatin Silencing at Rdna Chromatin Organization Nucleosome Assembly DNA Replication Dependent Nucleosome Assembly Blood Coagulation Telomere Organization Interleukin 7 Mediated Signaling Pathway Cellular Protein Metabolic Process Regulation of Megakaryocyte Differentiation Negative Regulation of Gene Expression Epigenetic Positive Regulation of Gene Expression Epigenetic Protein Heterotetramerization Regulation of Gene Silencing by Mirna Regulation of Gene Silencing Regulation of Hematopoietic Stem Cell Differentiation	Nuclear Chromosome Nucleosome Nuclear Nucleosome Extracellular Region Nucleus Nucleoplasm Chromosome Membrane Protein Containing Complex Extracellular Exosome
B,F	Histone H4 (3W97:B,F)	DNA Binding RNA Binding Protein Binding Protein Domain Specific Binding Histone Binding Protein Heterodimerization Activity	Chromatin Silencing at Rdna Double Strand Break Repair Via Nonhomologous End Joining Nucleosome Assembly DNA Replication Dependent Nucleosome Assembly DNA Replication Independent Nucleosome Assembly DNA Templated Transcription Initiation Telomere Capping Telomere Organization Cenp a Containing Nucleosome Assembly Cellular Protein Metabolic Process Regulation of Megakaryocyte Differentiation Negative Regulation of Megakaryocyte Differentiation Negative Regulation of Gene Expression Epigenetic Positive Regulation of Gene Expression Epigenetic Protein Heterotetramerization Regulation of Gene Silencing by Mirna Regulation of Hematopoietic Stem Cell Differentiation Beta Catenin Tcf Complex Assembly	Nuclear Chromosome Nuclear Chromosome Telomeric Region Nucleosome Nuclear Nucleosome Extracellular Region Nucleus Nucleoplasm Chromosome Membrane Protein Containing Complex Extracellular Exosome
C,G	Histone H2A type 1-B/E (3W97:C,G)	DNA Binding Protein Binding Protein Heterodimerization Activity	Chromatin Silencing Negative Regulation of Cell Proliferation	Nucleosome Nuclear Chromatin Nucleus Chromosome Extracellular Exosome
D,H	Histone H2B type 1-J (3W97:D,H)	DNA Binding Protein Heterodimerization Activity	none	Nucleosome
I,J	146-mer DNA (3W97:I,J)	none	none	none

Protein Modification Annotation

Type	PDB Residue Nr.	Description

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139555 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

3W97

Crystal Structure of Human Nucleosome Core Particle lacking H2B N-terminal region

Macromolecule Annotations for the Entities in PDB 3W97

Protein Family Annotation Pfam Database Homepage

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation