Macromolecule Annotations for the Entities in PDB 3VX8

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF03986 Autophagy_N Autophagocytosis associated protein (Atg3), N-terminal domain Domain Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the lysosome/vacuole. Atg3 is a ubiquitin like modifier that is topologically similar to the canonical E2 enzyme [3]. It catalyses the conjugation of Atg8 and phosphatidylethanolamine [4]. PFAM PF03986
B PF10381 Autophagy_Cterm Autophagocytosis associated protein C-terminal Domain Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the vacuole. The small C-terminal domain is likely to be a distinct binding region for the stability of the autophagosome complex [2]. It carries a highly characteristic conserved FLKF sequence motif. PFAM PF10381
B PF03987 Autophagy_act_C Autophagocytosis associated protein, active-site domain Domain Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the vacuole. The cysteine residue within the HPC motif is the putative active-site residue for recognition of the Apg5 subunit of the autophagosome complex [2]. PFAM PF03987

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,D Ubiquitin-like modifier-activating enzyme atg7 (3VX8:A,D)
  • none
B,C Autophagy-related protein 3 (3VX8:B,C)

Protein Modification Annotation

Type PDB Residue Nr. Description