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HIV-1 antibody 2F5 in complex with epitope scaffold ES2
Annotation data related to this entry.
3LEV
  •   Protein Family Annotation: Pfam Classification   Hide
    Chain Pfam Accession Pfam Family Identifier Pfam Description Type Comment
    L PF13927   Ig_3 Immunoglobulin domain Domain This family contains immunoglobulin-like domains. Source: Pfam  
    L PF07654   C1-set Immunoglobulin C1-set domain Domain Source: Pfam  
    L PF08205   C2-set_2 CD80-like C2-set immunoglobulin domain Domain These domains belong to the immunoglobulin superfamily. Source: Pfam  
    L PF13927   Ig_3 Immunoglobulin domain Domain This family contains immunoglobulin-like domains. Source: Pfam  
    H PF07654   C1-set Immunoglobulin C1-set domain Domain Source: Pfam  
    L PF00047   ig Immunoglobulin domain Domain Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions. The Pfam alignments do not include the first and last strand of the immunoglobulin-like domain. Source: Pfam  
    H PF07686   V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Source: Pfam  
    A PF04542   Sigma70_r2 Sigma-70 region 2 Domain Region 2 of sigma-70 is the most conserved region of the entire protein. All members of this class of sigma-factor contain region 2. The high conservation is due to region 2 containing both the -10 promoter recognition helix and the primary core RNA polymerase binding determinant. The core binding helix, interacts with the clamp domain of the largest polymerase subunit, beta prime [1,2]. The aromatic residues of the recognition helix, found at the C-terminus of this domain are though to mediate strand separation, thereby allowing transcription initiation [1,2]. Source: Pfam  
    L PF07686   V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Source: Pfam  
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Annotations in orange boxes have been gathered from external resources.