Macromolecule Annotations for the Entities in PDB 3J2W

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
A PF01589 Alpha_E1_glycop Alphavirus E1 glycoprotein Family
E PF01589 Alpha_E1_glycop Alphavirus E1 glycoprotein Family
M PF00943 Alpha_E2_glycop Alphavirus E2 glycoprotein Family
I PF00944 Peptidase_S3 Alphavirus core protein Domain Also known as coat protein C and capsid protein C. This makes the literature very confusing. Alphaviruses consist of a nucleoprotein core, a lipid membrane which envelopes the core, and glycoprotein spikes protruding from the lipid membrane. PFAM PF00944
Q PF00943 Alpha_E2_glycop Alphavirus E2 glycoprotein Family

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
A,B,C,D Glycoprotein E1 (3J2W:A,B,C,D)
  • none
M,N,O Glycoprotein E2 (3J2W:M,N,O)
  • none
P Glycoprotein E2 (3J2W:P)
  • none
E,F,G,H Glycoprotein E1 (3J2W:E,F,G,H)
  • none
Q,R,S,T Glycoprotein E2 (3J2W:Q,R,S,T)
  • none
I,J,K,L Capsid protein (3J2W:I,J,K,L)

Protein Modification Annotation

Type PDB Residue Nr. Description