Structural and biophysical properties of metal-free pathogenic SOD1 mutants A4V and G93A.

Galaleldeen, A; Strange, R.W; Whitson, L.J; Antonyuk, S.V; Narayana, N; Taylor, A.B; Schuermann, J.P; Holloway, S.P; Hasnain, S.S; Hart, P.J.

134436 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

3GZO

HUMAN SOD1 G93A Variant

Macromolecule Annotations for the Entities in PDB 3GZO

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains	Domain	Class	Architecture	Topology
A	3gzoA00	Mainly Beta	Sandwich	Immunoglobulin-like
B	3gzoB00	Mainly Beta	Sandwich	Immunoglobulin-like
C	3gzoC00	Mainly Beta	Sandwich	Immunoglobulin-like
D	3gzoD00	Mainly Beta	Sandwich	Immunoglobulin-like
E	3gzoE00	Mainly Beta	Sandwich	Immunoglobulin-like
F	3gzoF00	Mainly Beta	Sandwich	Immunoglobulin-like
G	3gzoG00	Mainly Beta	Sandwich	Immunoglobulin-like
H	3gzoH00	Mainly Beta	Sandwich	Immunoglobulin-like
I	3gzoI00	Mainly Beta	Sandwich	Immunoglobulin-like
J	3gzoJ00	Mainly Beta	Sandwich	Immunoglobulin-like

Protein Family Annotation Pfam Database Homepage

Chains	Pfam Accession	Pfam Identifier	Pfam Description	Type	Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A,B,C,D,E,F,G,H,I,J	Superoxide dismutase [Cu-Zn] (3GZO:A,B,C,D,E,F,G,H,I,J)	Superoxide Dismutase Activity Copper Ion Binding Protein Binding Zinc Ion Binding Antioxidant Activity Oxidoreductase Activity Enzyme Binding Protein Phosphatase 2b Binding Identical Protein Binding Protein Homodimerization Activity Metal Ion Binding Rac Gtpase Binding Chaperone Binding	Activation of Mapk Activity Response to Reactive Oxygen Species Response to Superoxide Ovarian Follicle Development Positive Regulation of Cytokine Production Placenta Development Retina Homeostasis Response to Amphetamine Myeloid Cell Homeostasis Platelet Degranulation Glutathione Metabolic Process Superoxide Metabolic Process Cellular Iron Ion Homeostasis Response to Oxidative Stress Spermatogenesis Embryo Implantation Aging Cell Aging Sensory Perception of Sound Locomotory Behavior Anterograde Axonal Transport Retrograde Axonal Transport Regulation of Blood Pressure Response to Heat Response to Organic Substance Transmission of Nerve Impulse Removal of Superoxide Radicals Response to Nutrient Levels Peripheral Nervous System Myelin Maintenance Positive Regulation of Superoxide Anion Generation Regulation of T Cell Differentiation in Thymus Response to Carbon Monoxide Cellular Response to Oxidative Stress Interleukin 12 Mediated Signaling Pathway Cellular Response to Potassium Ion Regulation of Multicellular Organism Growth Response to Drug Response to Hydrogen Peroxide Superoxide Anion Generation Positive Regulation of Apoptotic Process Negative Regulation of Apoptotic Process Positive Regulation of Catalytic Activity Regulation of Gtpase Activity Negative Regulation of Neuron Apoptotic Process Response to Ethanol Negative Regulation of Cholesterol Biosynthetic Process Regulation of Protein Kinase Activity Regulation of Organ Growth Response to Antibiotic Response to Copper Ion Muscle Cell Cellular Homeostasis Thymus Development Response to Axon Injury Hydrogen Peroxide Biosynthetic Process Regulation of Mitochondrial Membrane Potential Oxidation Reduction Process Heart Contraction Neurofilament Cytoskeleton Organization Relaxation of Vascular Smooth Muscle Auditory Receptor Cell Stereocilium Organization Cellular Response to Cadmium Ion Cellular Response to ATP Reactive Oxygen Species Metabolic Process Response to Antipsychotic Drug Positive Regulation of Oxidative Stress Induced Intrinsic Apoptotic Signaling Pathway	Extracellular Region Extracellular Space Nucleus Nucleoplasm Cytoplasm Mitochondrion Mitochondrial Intermembrane Space Mitochondrial Matrix Lysosome Peroxisome Cytosol Plasma Membrane Secretory Granule Extracellular Matrix Dense Core Granule Cytoplasmic Vesicle Dendrite Cytoplasm Neuron Projection Neuronal Cell Body Myelin Sheath Protein Complex Extracellular Exosome Axon Cytoplasm

Protein Modification Annotation

Type	PDB Residue Nr.	Description

The RCSB PDB is funded by a grant (DBI-1338415) from the National Science Foundation, the National Institutes of Health, and the US Department of Energy.

Prepare Data

Validate Data

Deposit Data

Deposition Help & Resources

134436 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

3GZO

HUMAN SOD1 G93A Variant

Macromolecule Annotations for the Entities in PDB 3GZO

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Protein Family Annotation Pfam Database Homepage

Gene Product Annotation Gene Ontology Consortium Homepage

Protein Modification Annotation