Macromolecule Annotations for the Entities in PDB 1Y1Y

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A d1y1ya_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
B d1y1yb_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
C d1y1yc_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
D d1y1yd_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
E d1y1ye_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
F d1y1yf_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
G d1y1yg_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
H d1y1yh_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
I d1y1yi_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
J d1y1yj_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
K d1y1yk_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
L d1y1yl_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
S d1y1ys_ Low resolution protein structures RNA polymerase RNA polymerase RNA polymerase Complete 12-subunit RNA polymerase II complex Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
T 5'-D(P*TP*AP*CP*GP*CP*CP*T)-3' (1Y1Y:T)
  • none
  • none
  • none
P 5'-R(P*AP*GP*GP*C)-3' (1Y1Y:P)
  • none
  • none
  • none
A DNA-directed RNA polymerase II largest subunit (1Y1Y:A)
B DNA-directed RNA polymerase II 140 kDa polypeptide (1Y1Y:B)
C DNA-directed RNA polymerase II 45 kDa polypeptide (1Y1Y:C)
D DNA-directed RNA polymerase II 32 kDa polypeptide (1Y1Y:D)
E DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide (1Y1Y:E)
F DNA-directed RNA polymerases I, II, and III 23 kDa polypeptide (1Y1Y:F)
G DNA-directed RNA polymerase II 19 kDa polypeptide (1Y1Y:G)
H DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (1Y1Y:H)
I DNA-directed RNA polymerase II subunit 9 (1Y1Y:I)
J DNA-directed RNA polymerases I/II/III subunit 10 (1Y1Y:J)
K DNA-directed RNA polymerase II 13.6 kDa polypeptide (1Y1Y:K)
L DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide (1Y1Y:L)
S Transcription elongation factor S-II (1Y1Y:S)

Protein Modification Annotation

Type PDB Residue Nr. Description