Macromolecule Annotations for the Entities in PDB 1S72

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
A91-237 d1s72a1 All beta proteins SH3-like barrel Translation proteins SH3-like domain C-terminal domain of ribosomal protein L2 C-terminal domain of ribosomal protein L2 Archaeon Haloarcula marismortui [TaxId: 2238]
A1-90 d1s72a2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like N-terminal domain of ribosomal protein L2 Archaeon Haloarcula marismortui [TaxId: 2238]
B d1s72b_ All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Ribosomal protein L3 Ribosomal protein L3 Archaeon Haloarcula marismortui [TaxId: 2238]
C d1s72c_ Alpha and beta proteins (a/b) Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 Archaeon Haloarcula marismortui [TaxId: 2238]
D d1s72d_ Alpha and beta proteins (a+b) RL5-like RL5-like Ribosomal protein L5 Ribosomal protein L5 Archaeon Haloarcula marismortui [TaxId: 2238]
E1-79 d1s72e1 Alpha and beta proteins (a+b) Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6 Archaeon Haloarcula marismortui [TaxId: 2238]
E80-172 d1s72e2 Alpha and beta proteins (a+b) Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6 Archaeon Haloarcula marismortui [TaxId: 2238]
F d1s72f_ Alpha and beta proteins (a+b) Bacillus chorismate mutase-like L30e-like L30e/L7ae ribosomal proteins Ribosomal protein L7ae Archaeon Haloarcula marismortui [TaxId: 2238]
G d1s72g_ Peptides Ribosomal protein L10 Ribosomal protein L10 Ribosomal protein L10 Ribosomal protein L10 Archaeon Haloarcula marismortui [TaxId: 2238]
H d1s72h_ Alpha and beta proteins (a+b) alpha/beta-Hammerhead Ribosomal protein L16p/L10e Ribosomal protein L10e Ribosomal protein L10e Archaeon Haloarcula marismortui [TaxId: 2238]
I d1s72i_ All alpha proteins DNA/RNA-binding 3-helical bundle Ribosomal protein L11, C-terminal domain Ribosomal protein L11, C-terminal domain Ribosomal protein L11, C-terminal domain Archaeon Haloarcula marismortui [TaxId: 2238]
J d1s72j_ Alpha and beta proteins (a/b) Ribosomal protein L13 Ribosomal protein L13 Ribosomal protein L13 Ribosomal protein L13 Archaeon Haloarcula marismortui [TaxId: 2238]
K d1s72k_ All beta proteins Ribosomal protein L14 Ribosomal protein L14 Ribosomal protein L14 Ribosomal protein L14 Archaeon Haloarcula marismortui [TaxId: 2238]
L d1s72l_ Alpha and beta proteins (a/b) Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal protein L15 (L15p) Archaeon Haloarcula marismortui [TaxId: 2238]
M d1s72m_ Alpha and beta proteins (a+b) Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e L15e Ribosomal protein L15e Archaeon Haloarcula marismortui [TaxId: 2238]
N d1s72n_ Alpha and beta proteins (a/b) Ribonuclease H-like motif Translational machinery components Ribosomal protein L18 and S11 Ribosomal protein L18 (L18p) Archaeon Haloarcula marismortui [TaxId: 2238]
O d1s72o_ Alpha and beta proteins (a/b) Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal protein L18e Archaeon Haloarcula marismortui [TaxId: 2238]
P d1s72p_ All alpha proteins Ribosomal protein L19 (L19e) Ribosomal protein L19 (L19e) Ribosomal protein L19 (L19e) Ribosomal protein L19 (L19e) Archaeon Haloarcula marismortui [TaxId: 2238]
Q d1s72q_ All beta proteins SH3-like barrel Translation proteins SH3-like domain Ribosomal proteins L24p and L21e Ribosomal proteins L21e Archaeon Haloarcula marismortui [TaxId: 2238]
R d1s72r_ Alpha and beta proteins (a+b) Ribosomal protein L22 Ribosomal protein L22 Ribosomal protein L22 Ribosomal protein L22 Archaeon Haloarcula marismortui [TaxId: 2238]
S d1s72s_ Alpha and beta proteins (a+b) Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e L23p Ribosomal protein L23 Archaeon Haloarcula marismortui [TaxId: 2238]
T d1s72t_ All beta proteins SH3-like barrel Translation proteins SH3-like domain Ribosomal proteins L24p and L21e Ribosomal proteins L24 (L24p) Archaeon Haloarcula marismortui [TaxId: 2238]
U d1s72u_ Small proteins Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) Ribosomal protein L24e Ribosomal protein L24e Archaeon Haloarcula marismortui [TaxId: 2238]
V d1s72v_ All alpha proteins Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p) Archaeon Haloarcula marismortui [TaxId: 2238]
W d1s72w_ Alpha and beta proteins (a+b) Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Archaeal L30 (L30a) Archaeon Haloarcula marismortui [TaxId: 2238]
X d1s72x_ Alpha and beta proteins (a+b) Ribosomal protein L31e Ribosomal protein L31e Ribosomal protein L31e Ribosomal protein L31e Archaeon Haloarcula marismortui [TaxId: 2238]
Y d1s72y_ Alpha and beta proteins (a/b) Barstar-like Ribosomal protein L32e Ribosomal protein L32e Ribosomal protein L32e Archaeon Haloarcula marismortui [TaxId: 2238]
Z d1s72z_ Small proteins Rubredoxin-like Zn-binding ribosomal proteins Ribosomal protein L37ae Ribosomal protein L37ae Archaeon Haloarcula marismortui [TaxId: 2238]
1 d1s721_ Small proteins Rubredoxin-like Zn-binding ribosomal proteins Ribosomal protein L37e Ribosomal protein L37e Archaeon Haloarcula marismortui [TaxId: 2238]
2 d1s722_ All alpha proteins Non-globular all-alpha subunits of globular proteins Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e Archaeon Haloarcula marismortui [TaxId: 2238]
3 d1s723_ Small proteins Rubredoxin-like Zn-binding ribosomal proteins Ribosomal protein L44e Ribosomal protein L44e Archaeon Haloarcula marismortui [TaxId: 2238]

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Chains Domain Class Architecture Topology Homology
1 1s72100 Mainly Beta Single Sheet N-terminal domain of TfIIb
2 1s72200 Mainly Alpha Orthogonal Bundle Atp Synthase Epsilon Chain; Chain: I; Ribosomal protein L39e
3 1s72300 Alpha Beta Roll Nuclear Transport Factor 2; Chain: A,
A1 1s72A01 Mainly Beta Roll SH3 type barrels.
A2 1s72A02 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteins
A3 1s72A03 Few Secondary Structures Irregular Ribosomal protein L2; domain 3 Ribosomal protein L2, domain 3
B1 1s72B01 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu); domain 3 Translation factors
B2 1s72B02 Alpha Beta 2-Layer Sandwich Ribosomal Protein L3; Chain: B; domain 2,
B3 1s72B03 Few Secondary Structures Irregular Ribosomal protein L3; domain 3 Ribosomal protein L3, domain 3
C 1s72C00 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L4; Chain: A;
D 1s72D00 Alpha Beta 2-Layer Sandwich 50s Ribosomal Protein L5; Chain: A,
E1 1s72E01 Alpha Beta Alpha-Beta Complex Outer Surface Protein A; domain 3
E2 1s72E02 Alpha Beta Alpha-Beta Complex Outer Surface Protein A; domain 3
F 1s72F00 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30; Chain: A;
H 1s72H00 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3
I 1s72I00 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A
J 1s72J00 Alpha Beta Alpha-Beta Complex Ribosomal Protein L13p; Chain: A;
K 1s72K00 Mainly Beta Beta Barrel Ribosomal Protein L14 Ribosomal Protein L14;
L1 1s72L01 Few Secondary Structures Irregular Molecule: Ribosomal Protein L15; Chain: K; domain 1
L2 1s72L02 Alpha Beta Ribosomal Protein L15; Chain: K; domain 2 Ribosomal Protein L15; Chain: K; domain 2
M 1s72M00 Alpha Beta 3-Layer(aba) Sandwich Ribosomal protein L15e Ribosomal protein l15e
N 1s72N00 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase; domain 5
O 1s72O00 Alpha Beta Ribosomal Protein L15; Chain: K; domain 2 Ribosomal Protein L15; Chain: K; domain 2
P1 1s72P01 Mainly Alpha Orthogonal Bundle 50s Ribosomal Protein L19e, Chain O, domain 1
P2 1s72P02 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A
P3 1s72P03 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix- helix interfaces Single Heli x bin
Q 1s72Q00 Mainly Beta Roll SH3 type barrels. Myosin S1 fragment SH3-like barrel
R 1s72R00 Alpha Beta Alpha-Beta Complex Ribosomal Protein L22; Chain A Ribosomal Protein L22; Chain A
S 1s72S00 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits
T 1s72T00 Mainly Beta Roll SH3 type barrels.
U 1s72U00 Mainly Beta Roll Ribosomal Protein L24e; Chain: T;
V 1s72V00 Mainly Alpha Orthogonal Bundle Helix Hairpins
W1 1s72W01 Alpha Beta 2-Layer Sandwich Ribosomal Protein L30; Chain: A,
W2 1s72W02 Mainly Alpha Orthogonal Bundle 3-methyladenine DNA Glycosylase II; Chain A, domain 3
X 1s72X00 Alpha Beta Roll Ribosomal Protein L31e; Chain: W;
Z 1s72Z00 Mainly Beta Single Sheet N-terminal domain of TfIIb

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
0 23S ribosomal RNA (1S72:0)
  • none
  • none
  • none
9 5S ribosomal RNA (1S72:9)
  • none
  • none
  • none
A 50S ribosomal protein L2P (1S72:A)
B 50S ribosomal protein L3P (1S72:B)
C 50S ribosomal protein L4E (1S72:C)
D 50S ribosomal protein L5P (1S72:D)
E 50S ribosomal protein L6P (1S72:E)
F 50S ribosomal protein L7Ae (1S72:F)
G Acidic ribosomal protein P0 homolog (1S72:G)
H 50S ribosomal protein L10e (1S72:H)
I 50S ribosomal protein L11P (1S72:I)
J 50S ribosomal protein L13P (1S72:J)
K 50S ribosomal protein L14P (1S72:K)
L 50S ribosomal protein L15P (1S72:L)
M 50S ribosomal protein L15e (1S72:M)
N 50S ribosomal protein L18P (1S72:N)
O 50S ribosomal protein L18e (1S72:O)
P 50S ribosomal protein L19E (1S72:P)
Q 50S ribosomal protein L21e (1S72:Q)
R 50S ribosomal protein L22P (1S72:R)
S 50S ribosomal protein L23P (1S72:S)
T 50S ribosomal protein L24P (1S72:T)
U 50S ribosomal protein L24E (1S72:U)
V 50S ribosomal protein L29P (1S72:V)
W 50S ribosomal protein L30P (1S72:W)
X 50S ribosomal protein L31e (1S72:X)
Y 50S ribosomal protein L32E (1S72:Y)
Z 50S ribosomal protein L37Ae (1S72:Z)
1 50S ribosomal protein L37e (1S72:1)
2 50S ribosomal protein L39e (1S72:2)
3 50S ribosomal protein L44E (1S72:3)

Protein Modification Annotation

Type PDB Residue Nr. Description