Macromolecule Annotations for the Entities in PDB 1RTD

Domain Annotation: CATH CATH Database (version 4.0.0) Homepage

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
B PF06817 RVT_thumb Reverse transcriptase thumb domain Domain This domain is known as the thumb domain. It is composed of a four helix bundle [1]. PFAM PF06817
A PF00075 RNase_H RNase H Domain RNase H digests the RNA strand of an RNA/DNA hybrid. Important enzyme in retroviral replication cycle, and often found as a domain associated with reverse transcriptases. Structure is a mixed alpha+beta fold with three a/b/a layers. PFAM PF00075
A PF06817 RVT_thumb Reverse transcriptase thumb domain Domain This domain is known as the thumb domain. It is composed of a four helix bundle [1]. PFAM PF06817
B PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) Family
A PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) Family
A PF06815 RVT_connect Reverse transcriptase connection domain Domain This domain is known as the connection domain. This domain lies between the thumb and palm domains [1]. PFAM PF06815
B PF06815 RVT_connect Reverse transcriptase connection domain Domain This domain is known as the connection domain. This domain lies between the thumb and palm domains [1]. PFAM PF06815

Gene Product Annotation Gene Ontology Consortium Homepage

Chains Polymer Molecular Function Biological Process Cellular Component
E,G DNA TEMPLATE FOR REVERSE TRANSCRIPTASE (1RTD:E,G)
  • none
  • none
  • none
F,H DNA PRIMER FOR REVERSE TRANSCRIPTASE (1RTD:F,H)
  • none
  • none
  • none
A,C PROTEIN (REVERSE TRANSCRIPTASE) (1RTD:A,C)
  • none
  • none
B,D PROTEIN (REVERSE TRANSCRIPTASE) (1RTD:B,D)
  • none
  • none
  • none

Protein Modification Annotation

Type PDB Residue Nr. Description