Macromolecule Annotations for the Entities in PDB 1QD7

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
I PF00366 Ribosomal_S17 Ribosomal protein S17 Domain PFAM PF00366
G PF00410 Ribosomal_S8 Ribosomal protein S8 Domain PFAM PF00410
C PF01479 S4 S4 domain Domain The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA. PFAM PF01479
C PF00163 Ribosomal_S4 Ribosomal protein S4/S9 N-terminal domain Family
F PF00177 Ribosomal_S7 Ribosomal protein S7p/S5e Domain This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. PFAM PF00177
D PF03719 Ribosomal_S5_C Ribosomal protein S5, C-terminal domain Domain PFAM PF03719
D PF00333 Ribosomal_S5 Ribosomal protein S5, N-terminal domain Domain PFAM PF00333
H PF00312 Ribosomal_S15 Ribosomal protein S15 Domain PFAM PF00312
E PF01250 Ribosomal_S6 Ribosomal protein S6 Domain PFAM PF01250