Macromolecule Annotations for the Entities in PDB 1Q1J

Domain Annotation: SCOP Classification SCOP Database (version: 1.75) Homepage

Chains Domain Info Class Fold Superfamily Family Domain Species
H1-113 d1q1jh1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Human (Homo sapiens), cluster 4 [TaxId: 9606]
H114-227 d1q1jh2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Human (Homo sapiens) [TaxId: 9606]
I1-113 d1q1ji1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH Human (Homo sapiens), cluster 4 [TaxId: 9606]
I114-227 d1q1ji2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin heavy chain gamma constant domain 1, CH1- gamma Human (Homo sapiens) [TaxId: 9606]
L1-108 d1q1jl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain lambda variable domain, VL- lambda Human (Homo sapiens), cluster 2 [TaxId: 9606]
L109-213 d1q1jl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain lambda constant domain, CL- lambda Human (Homo sapiens) [TaxId: 9606]
M1-108 d1q1jm1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain lambda variable domain, VL- lambda Human (Homo sapiens), cluster 2 [TaxId: 9606]
M109-213 d1q1jm2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain- like) Immunoglobulin light chain lambda constant domain, CL- lambda Human (Homo sapiens) [TaxId: 9606]

Protein Family Annotation Pfam Database Homepage

Chains Pfam Accession Pfam Identifier Pfam Description Type Source
L PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
H PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654
H PF07686 V-set Immunoglobulin V-set domain Domain This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. PFAM PF07686
L PF07654 C1-set Immunoglobulin C1-set domain Domain PFAM PF07654

Protein Modification Annotation

Type PDB Residue Nr. Description